The remerger would have to go in a loop, personally speaking.
For instance, if the merger is done from 1010AD, then that's going back in time to unify it. At that point. The Dragon God, FATE, Lucca are alive. So hence, they will all exist now. The Dragon God may be unleashed since FATE would have no more flame, and in turn, FATE would lose power unless it has a backup system, and it only wanted the flame to create it's own spieces.
Maybe if it happens in 1010AD, the timeline progresses to 2400AD where there is no time crash, so then the past changes and there is no Dinopolis/ no FATE... But then there is no El Nido...
So yeah, it's kind of hard how you want to decide. It might be probable that Another World and Home World remerged from the past, but to the people of 1020AD, they'd just realise that certain things are missing, like FATE, The Dragon God, and Lucca would be back.