Do NDS emulators (i think of DeSmuME) have any GBA hardware emulation? They can emulate everything necessary to run CTDS. Can we rule out GBA hardware use? (Another thing to check - is it pixel-for-pixel similar to the original? uh, assuming GBA's mode7 is like SNES's)
another thought - NDS emulators usually translate and pass 3D to a PC's GPU right? So we can have features like high-resolution rendering, nicer antialiasing etc.
When i configuring these in DeSmuME, it seems not to affect the mode7 graphics in CTDS; i think this suggests it's not done with NDS 3D hardware.