Magus (Guile identity)
steamwolf: Now granted, the age difference can be argued but I'll say this: If David Bowie can be sixty years old and look thirty-fourty, then a magical demon king who most likely can open up time-traveling portals can be fourty and look however the hell he wants imo (Though I'd like to see someone proove Magus' age, Toriyama isn't very good at realism). Guile could pass for thirty honestly. Now sure, Magus looks like a demon/fiend/mystic. But does anyone wonder if perhaps Magus' form in CT is a disguise? Remember, when he appeared to the Mystics as Janus, they attacked him. It would logically make sense to put on a disguise, use a Scythe, and appear more evil in order to frighten Guardia and keep the Mystics loyal to him. Really, why would magical power alter his physical form? Dalton clearly shows the ability to cast something similar to Dark Matter and he looks the same as ever. Also, Magus has used disguises in the past such as The Prophet. Now this was just a hood with shoulders, but either way he's used a disguise before to benefit himself. Whose to say Magus is nothing more than this? Its not even his real name, and Kato has had Magus go even further and go by Magil in RD.
Serge-Descendant Theory
Jehmil
Magus: Should a part of me somehow even then remain, then perhaps will be the birth of something new-something with greater meaning than all this.
Well, I think that 'a part of me' and 'the birth of something new' imply that some form of Magus will save his sister in the future. If Magus ends up in 600 AD, he shouldn’t be alive by the time Schala was saved (1020 AD, the time of Chrono Cross,) but a descendant of his could. You should already see what my theory is: Serge is a descendant (or maybe some sort of weird reincarnation) of Magus, a newly born part of him so to speak. Schala chooses Serge specifically.
Also, on another note, one of Schala's lines in the ending to Magus is "The strength you wield now cannot defeat me. No, perhaps it is better said that no strength can." This line reminds me of how to get the 'good' ending in Chrono Cross you have to use element colors in a certain order on the Dream Devourer instead of fighting it normally (with 'strength.') This seems like a pretty obvious correlation to me, but it may not have been on purpose.
So, either Magus's descendants became part of Chronopolis and would eventually give birth to Serge, or Magus was deposited in early El Nido from the Darkness Beyond Time and integrated directly into the population that way.
From: Theory (People)